glimmer

Genetics

Software Description

Glimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria and archaea. Glimmer (Gene Locator and Interpolated Markov Modeler) uses interpolated Markov models (IMMs) to identify the coding regions and distinguish them from noncoding DNA.


Info

Module Name

glimmer

Last Updated On

08/29/2023

Support Level

Secondary Support

Software Access Level

Open Access

Home Page

http://www.cbcb.umd.edu/software/glimmer/

Documentation

Software Description

Glimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria and archaea. Glimmer (Gene Locator and Interpolated Markov Modeler) uses interpolated Markov models (IMMs) to identify the coding regions and distinguish them from noncoding DNA.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load glimmer

Depending on where you are working, there may be more than one version of glimmer available. To see which modules are available for loading you can run:

module avail glimmer

Agate Modules

Default

3.02

Other Modules

3.02

Mangi Modules

Default

3.02

Other Modules

3.02

Mesabi Modules

Default

3.02

Other Modules

3.02