lastz

Genetics

Software Description

1

Info

Module Name

lastz

Last Updated On

08/29/2023

Support Level

Secondary Support

Software Access Level

Open Access

Home Page

http://www.bx.psu.edu/~rsharris/lastz/

Documentation

Software Description

LASTZ is a program for aligning DNA sequences, a pairwise aligner. Originally designed to handle sequences the size of human chromosomes and from different species, it is also useful for sequences produced by NGS sequencing technologies such as Roche 454.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load lastz

Depending on where you are working, there may be more than one version of lastz available. To see which modules are available for loading you can run:

module avail lastz

Agate Modules

Default

1.03.02

Other Modules

1.02.00, 1.03.02, 1.04.00

Mangi Modules

Default

1.03.02

Other Modules

1.02.00, 1.03.02, 1.04.00

Mesabi Modules

Default

1.03.02

Other Modules

1.02.00, 1.03.02, 1.04.00