metamos

Genetics

Software Description

From the MetAMOS website: \"MetAMOS represents a focused effort to create automated, reproducible, traceable assembly & analysis infused with current best practices and state-of-the-art methods. MetAMOS for input can start with next-generation sequencing reads or assemblies, and as output, produces: assembly reports, genomic scaffolds, open-reading frames, variant motifs, taxonomic or functional annotations, Krona charts and HTML report.\"


Info

Module Name

metamos

Last Updated On

08/29/2023

Support Level

Secondary Support

Software Access Level

Open Access

Home Page

http://metamos.readthedocs.io/en/v1.5rc3/

Documentation

Software Description

From the MetAMOS website: \"MetAMOS represents a focused effort to create automated, reproducible, traceable assembly & analysis infused with current best practices and state-of-the-art methods. MetAMOS for input can start with next-generation sequencing reads or assemblies, and as output, produces: assembly reports, genomic scaffolds, open-reading frames, variant motifs, taxonomic or functional annotations, Krona charts and HTML report.\"

General Linux

To load this module for use in a Linux environment, you can run the command:

module load metamos

Depending on where you are working, there may be more than one version of metamos available. To see which modules are available for loading you can run:

module avail metamos

Agate Modules

Default

1.5rc3

Other Modules

1.5rc3

Mangi Modules

Default

1.5rc3

Other Modules

1.5rc3

Mesabi Modules

Default

1.5rc3

Other Modules

1.5rc3