sra-toolkit

Genetics

Software Description

1

Info

Module Name

sratoolkit

Last Updated On

08/29/2023

Support Level

Secondary Support

Software Access Level

Open Access

Home Page

http://www.ncbi.nlm.nih.gov/books/NBK158900/

Documentation

Software Description

The SRA Toolkit will allow you to programmatically access data housed within NCBI\'s Sequence Read Archive. You can also use the toolkit to convert between many bioinformatics file formats and the SRA format.

General Linux

To load this module for use in a Linux environment, you can run the command:

module load sratoolkit

Depending on where you are working, there may be more than one version of sratoolkit available. To see which modules are available for loading you can run:

module avail sratoolkit

Agate Modules

Default

3.0.0

Other Modules

2.1.6, 2.10.4, 2.5.4, 2.8.2, 3.0.0

Mangi Modules

Default

3.0.0

Other Modules

2.1.6, 2.10.4, 2.5.4, 2.8.2, 3.0.0

Mesabi Modules

Default

3.0.0

Other Modules

2.1.6, 2.10.4, 2.5.4, 2.8.2, 3.0.0